DB code: S00417
CATH domain | 3.40.718.10 : Isopropylmalate Dehydrogenase | Catalytic domain |
---|---|---|
E.C. | 1.1.1.85 | |
CSA | 1a05 | |
M-CSA | 1a05 | |
MACiE |
CATH domain | Related DB codes (homologues) |
---|---|
3.40.718.10 : Isopropylmalate Dehydrogenase | S00416 |
Uniprot Enzyme Name | UniprotKB | Protein name | Synonyms | Pfam |
---|---|---|---|
P12010 |
3-isopropylmalate dehydrogenase
|
EC
1.1.1.85
Beta-IPM dehydrogenase IMDH 3-IPM-DH |
PF00180
(Iso_dh)
[Graphical View] |
P61495 |
3-isopropylmalate dehydrogenase
|
EC
1.1.1.85
Beta-IPM dehydrogenase IMDH 3-IPM-DH |
PF00180
(Iso_dh)
[Graphical View] |
Q56268 |
3-isopropylmalate dehydrogenase
|
EC
1.1.1.85
Beta-IPM dehydrogenase IMDH 3-IPM-DH |
PF00180
(Iso_dh)
[Graphical View] |
KEGG enzyme name |
---|
3-isopropylmalate dehydrogenase
beta-isopropylmalic enzyme beta-isopropylmalate dehydrogenase threo-Ds-3-isopropylmalate dehydrogenase 3-carboxy-2-hydroxy-4-methylpentanoate:NAD+ oxidoreductase |
UniprotKB: Accession Number | Entry name | Activity | Subunit | Subcellular location | Cofactor |
---|---|---|---|---|---|
P12010 | LEU3_BACCO | (2R,3S)-3-isopropylmalate + NAD(+) = 4-methyl- 2-oxopentanoate + CO(2) + NADH. | Homodimer. | Cytoplasm. | Binds 1 magnesium or manganese ion per subunit. |
P61495 | LEU3_THETH | (2R,3S)-3-isopropylmalate + NAD(+) = 4-methyl- 2-oxopentanoate + CO(2) + NADH. | Homodimer. | Cytoplasm. | Binds 1 magnesium or manganese ion per subunit. |
Q56268 | LEU3_THIFE | (2R,3S)-3-isopropylmalate + NAD(+) = 4-methyl- 2-oxopentanoate + CO(2) + NADH. | Homodimer. | Cytoplasm. | Binds 1 magnesium or ion per subunit. |
KEGG Pathways | Map code | Pathways | E.C. |
---|---|---|
MAP00290 | Valine, leucine and isoleucine biosynthesis |
Compound table | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cofactors | Substrates | Products | Intermediates | ||||||||||
KEGG-id | C00305 | C04411 | C00003 | C04236 | C00004 | C00233 | C00011 | ||||||
E.C. | |||||||||||||
Compound | Magnesium | 3-Isopropylmalate | NAD+ | 3-Carboxy-4-methyl-2-oxopentanoate | NADH | 4-Methyl-2-oxopentanoate | CO2 | ||||||
Type | divalent metal (Ca2+, Mg2+) | carbohydrate,carboxyl group | amide group,amine group,nucleotide | carbohydrate,carboxyl group | amide group,amine group,nucleotide | carbohydrate,carboxyl group | others | ||||||
ChEBI |
18420 18420 |
43468 43468 |
15846 15846 |
1467 1467 |
16908 16908 |
48430 48430 |
16526 16526 |
||||||
PubChem |
888 888 |
5462261 5462261 |
5893 5893 |
5462259 5462259 |
439153 439153 |
70 70 |
280 280 |
||||||
1a05A | Bound:_MG | Bound:IPM | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1a05B | Bound:_MG | Bound:IPM | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1ayqA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1ayqB | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1dpzA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1dpzB | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1dr0A | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1dr0B | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1dr8A | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1dr8B | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1g2uA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1gc8A | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1gc8B | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1gc9A | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1hexA | Unbound | Unbound | Bound:NAD | Unbound | Unbound | Unbound | Unbound | ||||||
1idmA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1ipdA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1osiA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1osiB | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1osiC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1osiD | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1osjA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1osjB | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1xaaA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1xabA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1xacA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
1xadA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
2ayqA | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||
2ayqB | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound |
Reference for Active-site residues | ||
---|---|---|
resource | references | E.C. |
Literature [5], [12] & [15] |
Active-site residues | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
PDB | Catalytic residues | Cofactor-binding residues | Modified residues | Main-chain involved in catalysis | Comment | |||||
1a05A | TYR 140;LYS 190;ASP 222 | ASP 222;ASP 246;ASP 250(Magnesium binding) | ||||||||
1a05B | TYR 140;LYS 190;ASP 222 | ASP 222;ASP 246;ASP 250(Magnesium binding) | ||||||||
1ayqA | TYR 141;LYS 190;ASP 222 | ASP 222;ASP 246;ASP 250(Magnesium binding) | ||||||||
1ayqB | TYR 141;LYS 190;ASP 222 | ASP 222;ASP 246;ASP 250(Magnesium binding) | ||||||||
1dpzA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1dpzB | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1dr0A | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1dr0B | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1dr8A | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1dr8B | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1g2uA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | mutant A172V | |||||||
1gc8A | TYR 1139;LYS 1185;ASP 1217 | ASP 1217;ASP 1241;ASP 1245(Magnesium binding) | mutant A1172F | |||||||
1gc8B | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | mutant A172F | |||||||
1gc9A | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | mutant A172G | |||||||
1hexA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1idmA | TYR 137;LYS 183;ASP 215 | ASP 215;ASP 239;ASP 243(Magnesium binding) | mutant R82;K83 | |||||||
1ipdA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1osiA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1osiB | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1osiC | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1osiD | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1osjA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | mutant A172L | |||||||
1osjB | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1xaaA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1xabA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | ||||||||
1xacA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | mutant S82R | |||||||
1xadA | TYR 139;LYS 185;ASP 217 | ASP 217;ASP 241;ASP 245(Magnesium binding) | mutant S82R | |||||||
2ayqA | TYR 141;LYS 190;ASP 222 | ASP 222;ASP 246;ASP 250(Magnesium binding) | ||||||||
2ayqB | TYR 141;LYS 190;ASP 222 | ASP 222;ASP 246;ASP 250(Magnesium binding) |
References for Catalytic Mechanism | ||
---|---|---|
References | Sections | No. of steps in catalysis |
[5]
|
Fig.7, p.8675-8676 | |
[7]
|
||
[9]
|
Fig.1 | |
[15]
|
p.2164-2165 | |
[26]
|
p.976-980 |
References | |
---|---|
[1] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 3069841 |
Journal | J Biochem (Tokyo) |
Year | 1988 |
Volume | 104 |
Pages | 679-80 |
Authors | Katsube Y, Tanaka N, Takenaka A, Yamada T, Oshima T |
Title | Crystallization and preliminary X-ray data for 3-isopropylmalate dehydrogenase of Thermus thermophilus. |
Related PDB | |
Related UniProtKB | |
[2] | |
Resource | |
Comments | X-ray crystallography |
Medline ID | |
PubMed ID | 2277037 |
Journal | J Biochem (Tokyo) |
Year | 1990 |
Volume | 108 |
Pages | 449-56 |
Authors | Yamada T, Akutsu N, Miyazaki K, Kakinuma K, Yoshida M, Oshima T |
Title |
Purification, |
Related PDB | |
Related UniProtKB | |
[3] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 1901851 |
Journal | J Biochem (Tokyo) |
Year | 1991 |
Volume | 109 |
Pages | 1-2 |
Authors | Onodera K, Moriyama H, Takenaka A, Tanaka N, Akutsu N, Muro M, Oshima T, Imada K, Sato M, Katsube Y |
Title | Crystallization and preliminary X-ray studies of a Bacillus subtilis and Thermus thermophilus HB8 chimeric 3-isopropylmalate dehydrogenase. |
Related PDB | |
Related UniProtKB | |
[4] | |
Resource | |
Comments | X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS) |
Medline ID | 92085286 |
PubMed ID | 1748999 |
Journal | J Mol Biol |
Year | 1991 |
Volume | 222 |
Pages | 725-38 |
Authors | Imada K, Sato M, Tanaka N, Katsube Y, Matsuura Y, Oshima T |
Title |
Three-dimensional structure of a highly thermostable enzyme, |
Related PDB | 1ipd |
Related UniProtKB | P61495 |
[5] | |
Resource | |
Comments | Homologous enzyme |
Medline ID | |
PubMed ID | 1888729 |
Journal | Biochemistry |
Year | 1991 |
Volume | 30 |
Pages | 8671-8 |
Authors | Hurley JH, Dean AM, Koshland DE Jr, Stroud RM |
Title | Catalytic mechanism of NADP(+)-dependent isocitrate dehydrogenase: implications from the structures of magnesium-isocitrate and NADP+ complexes. |
Related PDB | |
Related UniProtKB | |
[6] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 1400259 |
Journal | J Biochem (Tokyo) |
Year | 1992 |
Volume | 112 |
Pages | 173-4 |
Authors | Sakurai M, Onodera K, Moriyama H, Matsumoto O, Tanaka N, Numata K, Imada K, Sato M, Katsube Y, Oshima T |
Title | Crystallization and preliminary X-ray studies of a Bacillus subtilis and Thermus thermophilus HB8 chimeric 3-isopropylmalate dehydrogenase and thermostable mutants of it. |
Related PDB | |
Related UniProtKB | |
[7] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 8405446 |
Journal | FEBS Lett |
Year | 1993 |
Volume | 332 |
Pages | 37-8 |
Authors | Miyazaki K, Oshima T |
Title | Tyr-139 in Thermus thermophilus 3-isopropylmalate dehydrogenase is involved in catalytic function. |
Related PDB | |
Related UniProtKB | |
[8] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 8029202 |
Journal | Protein Eng |
Year | 1994 |
Volume | 7 |
Pages | 453-9 |
Authors | Onodera K, Sakurai M, Moriyama H, Tanaka N, Numata K, Oshima T, Sato M, Katsube Y |
Title | Three-dimensional structures of chimeric enzymes between Bacillus subtilis and Thermus thermophilus 3-isopropylmalate dehydrogenases. |
Related PDB | |
Related UniProtKB | |
[9] | |
Resource | |
Comments | X-ray crystallography |
Medline ID | |
PubMed ID | 7881901 |
Journal | Structure |
Year | 1994 |
Volume | 2 |
Pages | 1007-16 |
Authors | Hurley JH, Dean AM |
Title | Structure of 3-isopropylmalate dehydrogenase in complex with NAD+: ligand-induced loop closing and mechanism for cofactor specificity. |
Related PDB | 1hex |
Related UniProtKB | |
[10] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 8140100 |
Journal | Protein Eng |
Year | 1994 |
Volume | 7 |
Pages | 99-102 |
Authors | Miyazaki K, Kadono S, Sakurai M, Moriyama H, Tanaka N, Oshima T |
Title | Chemical modification and site-directed mutagenesis of Tyr36 of 3-isopropylmalate dehydrogenase from Thermus thermophilus HB8. |
Related PDB | |
Related UniProtKB | |
[11] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 7590327 |
Journal | Gene |
Year | 1995 |
Volume | 164 |
Pages | 85-7 |
Authors | Kryger G, Wallon G, Lovett ST, Ringe D, Petsko GA |
Title | Revision of the amino-acid sequence of 3-isopropylmalate dehydrogenase from Salmonella typhimurium by means of X-ray crystallography. |
Related PDB | |
Related UniProtKB | |
[12] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 8576088 |
Journal | J Biochem (Tokyo) |
Year | 1995 |
Volume | 118 |
Pages | 745-52 |
Authors | Kadono S, Sakurai M, Moriyama H, Sato M, Hayashi Y, Oshima T, Tanaka N |
Title | Ligand-induced changes in the conformation of 3-isopropylmalate dehydrogenase from Thermus thermophilus. |
Related PDB | |
Related UniProtKB | |
[13] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 7608131 |
Journal | J Biochem (Tokyo) |
Year | 1995 |
Volume | 117 |
Pages | 408-13 |
Authors | Moriyama H, Onodera K, Sakurai M, Tanaka N, Kirino-Kagawa H, Oshima T, Katsube Y |
Title | The crystal structures of mutated 3-isopropylmalate dehydrogenase from Thermus thermophilus HB8 and their relationship to the thermostability of the enzyme. |
Related PDB | |
Related UniProtKB | |
[14] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 8637845 |
Journal | Protein Eng |
Year | 1995 |
Volume | 8 |
Pages | 763-7 |
Authors | Sakurai M, Moriyama H, Onodera K, Kadono S, Numata K, Hayashi Y, Kawaguchi J, Yamagishi A, Oshima T, Tanaka N |
Title |
The crystal structure of thermostable mutants of chimeric 3-isopropylmalate dehydrogenase, |
Related PDB | 1xac 1xad |
Related UniProtKB | |
[15] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 8535253 |
Journal | Protein Sci |
Year | 1995 |
Volume | 4 |
Pages | 2156-67 |
Authors | Dean AM, Dvorak L |
Title | The role of glutamate 87 in the kinetic mechanism of Thermus thermophilus isopropylmalate dehydrogenase. |
Related PDB | |
Related UniProtKB | |
[16] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 7773180 |
Journal | Protein Sci |
Year | 1995 |
Volume | 4 |
Pages | 84-92 |
Authors | Zhang T, Koshland DE Jr |
Title | Modeling substrate binding in Thermus thermophilus isopropylmalate dehydrogenase. |
Related PDB | |
Related UniProtKB | |
[17] | |
Resource | |
Comments | X-ray crystallography |
Medline ID | |
PubMed ID | |
Journal | Acta Crystallogr D Biol Crystallogr |
Year | 1996 |
Volume | 52 |
Pages | 124-8 |
Authors | Sakurai M, Ohzeki M, Miyazaki K, Moriyama H, Sato M, Tanaka N, Oshima T |
Title | Structure of a loop-deleted variant of 3-isopropylmalate dehydrogenase from Thermus thermophilus: An internal reprieve tolerance mechanism. |
Related PDB | 1idm |
Related UniProtKB | |
[18] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 8875643 |
Journal | Protein Eng |
Year | 1996 |
Volume | 9 |
Pages | 663-70 |
Authors | Magyar C, Szilagyi A, Zavodszky P |
Title | Relationship between thermal stability and 3-D structure in a homology model of 3-isopropylmalate dehydrogenase from Escherichia coli. |
Related PDB | |
Related UniProtKB | |
[19] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 15299625 |
Journal | Acta Crystallogr D Biol Crystallogr |
Year | 1996 |
Volume | 52 |
Pages | 623-30 |
Authors | Nagata C |
Title | Cryocrystallography of 3-Isopropylmalate Dehydrogenase from Thermus thermophilus and its Chimeric Enzyme. |
Related PDB | 1xaa 1xab |
Related UniProtKB | |
[20] | |
Resource | |
Comments | X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) |
Medline ID | 98158316 |
PubMed ID | 9498551 |
Journal | J Biochem (Tokyo) |
Year | 1997 |
Volume | 122 |
Pages | 1092-104 |
Authors | Tsuchiya D, Sekiguchi T, Takenaka A |
Title |
Crystal structure of 3-isopropylmalate dehydrogenase from the moderate facultative thermophile, |
Related PDB | 1ayq 2ayq |
Related UniProtKB | P12010 |
[21] | |
Resource | |
Comments | X-RAY CRYSTALLOGRAPHY (2.27 ANGSTROMS) |
Medline ID | 97240818 |
PubMed ID | 9086278 |
Journal | J Mol Biol |
Year | 1997 |
Volume | 266 |
Pages | 1016-31 |
Authors | Wallon G, Kryger G, Lovett ST, Oshima T, Ringe D, Petsko GA |
Title | Crystal structures of Escherichia coli and Salmonella typhimurium 3-isopropylmalate dehydrogenase and comparison with their thermophilic counterpart from Thermus thermophilus. |
Related PDB | |
Related UniProtKB | P61495 |
[22] | |
Resource | |
Comments | X-ray crystallography |
Medline ID | |
PubMed ID | 9051733 |
Journal | Protein Eng |
Year | 1997 |
Volume | 10 |
Pages | 45-52 |
Authors | Qu C, Akanuma S, Moriyama H, Tanaka N, Oshima T |
Title | A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase. |
Related PDB | 1osi 1osj |
Related UniProtKB | |
[23] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 9278279 |
Journal | Protein Eng |
Year | 1997 |
Volume | 10 |
Pages | 665-72 |
Authors | Wallon G, Lovett ST, Magyar C, Svingor A, Szilagyi A, Zavodszky P, Ringe D, Petsko GA |
Title |
Sequence and homology model of 3-isopropylmalate dehydrogenase from the psychrotrophic bacterium Vibrio sp. |
Related PDB | |
Related UniProtKB | |
[24] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 9761923 |
Journal | Acta Crystallogr D Biol Crystallogr |
Year | 1998 |
Volume | 54 |
Pages | 444-5 |
Authors | Suzuki T, Moriyama H, Hirose R, Sakurai M, Tanaka N, Oshima T |
Title |
Crystallization and preliminary X-ray studies on the hyperstable 3-isopropylmalate dehydrogenase from the thermoacidophilic archaeon Sulfolobus sp. |
Related PDB | |
Related UniProtKB | |
[25] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 9636162 |
Journal | Proc Natl Acad Sci U S A |
Year | 1998 |
Volume | 95 |
Pages | 7406-11 |
Authors | Zavodszky P, Kardos J, Svingor, Petsko GA |
Title | Adjustment of conformational flexibility is a key event in the thermal adaptation of proteins. |
Related PDB | |
Related UniProtKB | |
[26] | |
Resource | |
Comments | X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) |
Medline ID | 98416693 |
PubMed ID | 9739088 |
Journal | Structure |
Year | 1998 |
Volume | 6 |
Pages | 971-82 |
Authors | Imada K, Inagaki K, Matsunami H, Kawaguchi H, Tanaka H, Tanaka N, Namba K |
Title | Structure of 3-isopropylmalate dehydrogenase in complex with 3-isopropylmalate at 2.0 A resolution: the role of Glu88 in the unique substrate-recognition mechanism. |
Related PDB | 1a05 |
Related UniProtKB | Q56268 |
[27] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10683439 |
Journal | FEBS Lett |
Year | 2000 |
Volume | 468 |
Pages | 48-52 |
Authors | Nemeth A, Svingor A, Pocsik M, Dobo J, Magyar C, Szilagyi A, Gal P, Zavodszky P |
Title | Mirror image mutations reveal the significance of an intersubunit ion cluster in the stability of 3-isopropylmalate dehydrogenase. |
Related PDB | |
Related UniProtKB | |
[28] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10989439 |
Journal | Methods Enzymol |
Year | 2000 |
Volume | 324 |
Pages | 301-22 |
Authors | Hayashi-Iwasaki Y, Oshima T |
Title | Purification and characterization of recombinant 3-isopropylmalate dehydrogenases from Thermus thermophilus and other microorganisms. |
Related PDB | |
Related UniProtKB | |
[29] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10964981 |
Journal | Protein Eng |
Year | 2000 |
Volume | 13 |
Pages | 527-33 |
Authors | Hori T, Moriyama H, Kawaguchi J, Hayashi-Iwasaki Y, Oshima T, Tanaka N |
Title | The initial step of the thermal unfolding of 3-isopropylmalate dehydrogenase detected by the temperature-jump Laue method. |
Related PDB | |
Related UniProtKB | |
[30] | |
Resource | |
Comments | X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS) |
Medline ID | 20272095 |
PubMed ID | 10810156 |
Journal | Protein Eng |
Year | 2000 |
Volume | 13 |
Pages | 253-8 |
Authors | Nurachman Z, Akanuma S, Sato T, Oshima T, Tanaka N |
Title | Crystal structures of 3-isopropylmalate dehydrogenases with mutations at the C-terminus: crystallographic analyses of structure-stability relationships. |
Related PDB | 1dpz 1dr0 1dr8 |
Related UniProtKB | P61495 |
[31] | |
Resource | |
Comments | X-ray crystallography |
Medline ID | |
PubMed ID | 11173468 |
Journal | Acta Crystallogr D Biol Crystallogr |
Year | 2001 |
Volume | 57 |
Pages | 225-32 |
Authors | Qu C, Akanuma S, Tanaka N, Moriyama H, Oshima T |
Title |
Design, |
Related PDB | 1g2u 1gc8 1gc9 |
Related UniProtKB | |
[32] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 11369782 |
Journal | J Biol Chem |
Year | 2001 |
Volume | 276 |
Pages | 28121-5 |
Authors | Svingor A, Kardos J, Hajdu I, Nemeth A, Zavodszky P |
Title |
A better enzyme to cope with cold. |
Related PDB | |
Related UniProtKB | |
[33] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 11297665 |
Journal | Protein Eng |
Year | 2001 |
Volume | 14 |
Pages | 81-4 |
Authors | Hirose R, Suzuki T, Moriyama H, Sato T, Yamagishi A, Oshima T, Tanaka N |
Title | Crystal structures of mutants of Thermus thermophilus IPMDH adapted to low temperatures. |
Related PDB | |
Related UniProtKB | |
[34] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 11297666 |
Journal | Protein Eng |
Year | 2001 |
Volume | 14 |
Pages | 85-91 |
Authors | Suzuki T, Yasugi M, Arisaka F, Yamagishi A, Oshima T |
Title |
Adaptation of a thermophilic enzyme, |
Related PDB | |
Related UniProtKB |
Comments |
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This enzyme catalyzes two reactions; firstly the dehydrogenation of 3-carboxy-2-hydroxy-4-methylpentanoate, |
Created | Updated |
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2004-07-22 | 2009-02-26 |