Intermediate List in EzCatDB EzCatDB

Intermediate Compound List



Intermediate compounds in EzCatDB

Compound ID: No. of entries: Compound Name

I00001: 3 entries : Enolpyruvate
I00002: 1 entry : metaphosphate
I00003: 1 entry : Diaminovalerate
I00004: 1 entry : External aldimine intermediate (PLP-L-Asp)
I00005: 1 entry : Ketimine intermediate (PLP-Asp)
I00006: 4 entries : Ketimine intermediate (PLP-Glu)
I00007: 3 entries : External aldimine intermediate (PLP-L-Glu)
I00016: 2 entries : UDP-4-ketohexopyranose
I00017: 2 entries : 3-Hydroxy-androsta-3,5-dien
I00018: 1 entry : 6-Hydroxy-adenosine
I00019: 2 entries : S-hemithioacetal-glutathione
I00020: 2 entries : S-enediol-glutathione
I00021: 5 entries : Iminoquinone=substrate (Topaquinone-related)
I00022: 5 entries : Aminoquinol=substrate (Topaquinone-related)
I00023: 5 entries : Aminoquinol/Semiquinone (Topaquinone-related)
I00024: 5 entries : Iminoquinone (Topaquinone-related)
I00025: 1 entry : External aldimine intermediate (PLP-L-Tyr)
I00026: 1 entry : Ketimine intermediate (PLP-Tyr)
I00027: 1 entry : External aldimine intermediate (PLP-aromatic amino acid)
I00028: 1 entry : Ketimine intermediate (PLP-aromatic amino acid)
I00029: 2 entries : External aldimine intermediate (PLP-D-Ala)
I00030: 2 entries : Ketimine intermediate (PLP-Ala)
I00031: 1 entry : External aldimine intermediate (PLP-D-Glu)
I00032: 4 entries : Quinonoid intermediate (PLP-Ala)
I00033: 4 entries : Quinonoid intermediate (PLP-Glu)
I00034: 1 entry : Quinonoid intermediate (PLP-Asp)
I00035: 1 entry : Quinonoid intermediate (PLP-Tyr)
I00036: 1 entry : Quinonoid intermediate (PLP-aromatic amino acid)
I00037: 1 entry : External aldimine intermediate (PLP-SAM)
I00038: 1 entry : Quinonoid intermediate (PLP-SAM)
I00039: 1 entry : Ketimine intermediate (PLP-SAM)
I00040: 1 entry : Ketimine intermediate (PLP-Diaminononanoate)
I00041: 1 entry : Quinonoid intermediate (PLP-Diaminononanoate)
I00042: 1 entry : External aldimine intermediate (PLP-Diaminononanoate)
I00043: 2 entries : External aldimine intermediate (PLP-L-Ser)
I00044: 2 entries : External aldimine intermediate (PLP-Gly)
I00045: 2 entries : Quinonoid intermediate (PLP-Gly)
I00046: 1 entry : 5-hydroxymethylene-tetrahydrofolate
I00047: 1 entry : 5-iminium-tetrahydrofolate
I00048: 1 entry : Geminal-diamine transition-state (active-site-Lys-PLP-Gly)
I00049: 3 entries : External aldimine intermediate (PLP-L-Ala)
I00050: 1 entry : External aldimine intermediate (PLP-beta-ketoacid-aminononanoate)
I00051: 1 entry : Quinonoid intermediate (PLP-Aminno-oxononanoate)
I00052: 1 entry : External aldimine intermediate (PLP-Aminno-oxononanoate)
I00053: 1 entry : CdRP intermediate I1
I00054: 1 entry : CdRP intermediate I2
I00056: 1 entry : 4-hydroxy-deoxycytidine monophosphate
I00057: 1 entry : 1-[(2-carboxyphenyl)imino]-1-deoxyribulose 5-phosphate
I00058: 1 entry : 1-[(2-carboxyphenyl)amino]-1-deoxyribulose 5-phosphate
I00059: 1 entry : N'-[(5'-phosphoribulosyl)formimino]-5-aminoimidazole-4-carboxamide ribonucleotide-Schiff-base intermediate
I00060: 1 entry : N'-[(5'-phosphoribulosyl)formimino]-5-aminoimidazole-4-carboxamide ribonucleotide
I00061: 1 entry : Peptidyl-Glu-D-xylose
I00062: 2 entries : Peptidyl-ASP-beta-D-galactose
I00063: 1 entry : Peptidyl-ASP-beta-N-acetylgalactosaminie
I00064: 1 entry : 2,3-cis-enediol-D-ribulose-1,5-bisphosphate
I00065: 1 entry : 2-Carboxy-3,3-diol-D-arabinitol-1,5-bisphosphate
I00066: 1 entry : 2-Peroxy-3,3-diol-D-arabinitol-1,5-bisphosphate
I00068: 1 entry : 3-Carboxy-2,5-dihydro-5-oxofuran-2-enolate
I00069: 1 entry : 2,5-Dihydro-5-oxofuran-2-enolate
I00070: 1 entry : 2-Chloro-2,5-dihydro-5-oxofuran-2-enolate
I00071: 1 entry : External aldimine intermediate (PLP-S-alkyl-L-cysteine S-oxide)
I00072: 1 entry : 5,6-enediol-D-glucarate
I00073: 1 entry : 4,5-enol-4-deoxy-D-glucarate
I00074: 1 entry : Phenylethene-1,2-triol
I00078: 1 entry : Phenyl-tetrahedral intermediate (Peptidyl-Ser-phenylacetate-tetrahedral intermediate)
I00081: 1 entry : Feruloyl-polysaccharide-tetrahedral intermediate
I00082: 1 entry : Acyl-enzyme (Peptidyl-SER-ferulate)
I00083: 1 entry : Feruloyl-tetrahedral intermediate
I00084: 1 entry : Peptidyl-Ser-acylcholine-tetrahedral-intermediate
I00085: 60 entries : Acyl-enzyme (Peptidyl-Ser-acyl group)
I00086: 60 entries : Peptidyl-Ser-tetrahedral-intermediate
I00087: 52 entries : Peptidyl-Ser-tetrahedral intermediate (with previous peptide)
I00088: 2 entries : GDP-4-dehydro-mannose
I00089: 2 entries : GDP-4,5-ene-mannose
I00090: 2 entries : GDP-6-deoxy-4-dehydro-5,6-ene-mannose
I00091: 1 entry : dTDP-4-dehydro-glucose
I00092: 1 entry : dTDP-6-deoxy-4-dehydro-5,6-ene-glucose
I00093: 1 entry : 6-(1'-hydroxy-2'-oxopropyl)-tetrahydropterin
I00094: 1 entry : 6-lactoyl-tetrahydropterin
I00095: 1 entry : 3-oxo-1,6,8-trihydroxynaphthalene
I00096: 1 entry : ADP-D-glycero-D-manno-6-keto-heptose
I00097: 1 entry : GDP-6-deoxy-3,4-ene-mannose
I00098: 1 entry : GDP-6-deoxy-4-dehydro-altrose
I00099: 1 entry : GDP-6-deoxy-4,5-ene-altrose
I00100: 1 entry : GDP-6-deoxy-4-dehydro-L-galactose
I00101: 2 entries : Mevaldyl-CoA
I00102: 2 entries : Mevaldehyde
I00103: 1 entry : GDP-6-dehydro-D-mannose
I00104: 1 entry : Protein [GDP-6-S-D-mannose]-L-cysteine
I00105: 1 entry : Protein [GDP-6-S-6-dehydro-D-mannose]-L-cysteine
I00106: 1 entry : UDP-6-dehydro-D-glucose
I00107: 1 entry : Protein [UDP-6-S-D-glucose]-L-cysteine
I00108: 1 entry : Protein [UDP-6-S-6-dehydro-D-glucose]-L-cysteine
I00109: 1 entry : Protein [L-arabinofuranose]-L-Glutamate
I00110: 1 entry : N-tetrahedral intermediate of N-acetyl-D-glucosamine 6-phosphate
I00111: 2 entries : Intramolecular cyclic intermediate at reducing end of hyaluronate
I00112: 1 entry : Intramolecular cyclic intermediate at reducing end of terminal-(Man)n-GlcNAc
I00113: 1 entry : Maltose 3'-dehydro-6'-phosphate
I00114: 1 entry : 2,3-ene-6-phosphate-alpha-D-allopyranosyl-(1->4)-D-glucose
I00115: 1 entry : D-glucose-1-deoxy-3-dehydro-6-phosphate-1,2-ene
I00116: 1 entry : alpha-D-allose-2,3-ene-6-phosphate
I00117: 1 entry : alpha-D-glucose-3-dehydro-6-phosphate
I00118: 6 entries : Peptidyl-Glu-D-mannan
I00119: 1 entry : Peptidyl-Glu-1,3-beta-D-glucan
I00120: 4 entries : Peptidyl-Glu-cellulose
I00121: 2 entries : Peptidyl-Glu-galactan
I00122: 1 entry : Peptidyl-Glu-Glucose
I00123: 5 entries : Peptidyl-Ser-tetrahedral intermediate (with previous carboxylic-ester)
I00124: 1 entry : Peptidyl-Ser-tetrahedral intermediate (with previous acetylcholine carboxylic-ester)
I00125: 2 entries : Acetyl-enzyme (Peptidyl-Ser-acetyl group)
I00126: 2 entries : Peptidyl-Ser-acetyl-tetrahedral-intermediate
I00127: 3 entries : Diaminohydroxymethanolate
I00128: 1 entry : D-alanine adenylate
I00129: 1 entry : Peptidyl-Glu-D-mannobiose
I00130: 1 entry : Peptidyl-Glu-D-galactomannobiose
I00131: 1 entry : Peptidyl-Ser-phosphopantetheine-S-D-alanine
I00132: 3 entries : Peptidyl-Cys-tetrahedral-acetyl-CoA
I00133: 3 entries : Peptidyl-Cys-S-acetyl
I00134: 4 entries : [Acyl-carrier protein;ACP]-decarboxylated malonyl group (Peptidyl-Ser-phosphopantetheine-S-enolate)
I00135: 3 entries : Peptidyl-Cys-tetrahedral-acetyl-keto-[acyl-carrier protein]
I00136: 17 entries : Amino-diol-tetrahedral intermediate
I00137: 1 entry : Amino-diol-tetrahedral intermediate of N4-(Acetyl-beta-D-glucosaminyl)asparagine
I00138: 1 entry : Peptidyl-Cys-tetrahedral-(Z)-hexadec-11-enoyl-[acyl-carrier protein]
I00139: 1 entry : Peptidyl-Cys-S-(Z)-hexadec-11-enoyl
I00140: 1 entry : [Acyl-carrier protein;ACP]-tetrahedral-malonyl group
I00141: 1 entry : Peptidyl-Cys-tetrahedral-(Z)-hexadec-11-enoyl-keto-[acyl-carrier protein]
I00142: 4 entries : Peptidyl-Cys-sulfenic acid
I00143: 4 entries : Transient disulfide bond between peptidyl-Cys
I00144: 1 entry : Peptidyl-His-Cys-sulfenic acid (hydroxy-imidazolyl-sulfanyl-methane)
I00145: 1 entry : Peptidyl-protonated-His-Cys-sulfenic acid (hydroxy-protonated-imidazolyl-sulfanyl-methane)
I00146: 1 entry : 3-phenyl-2-hydroxy-cyclohexa-3,5-dienone
I00147: 2 entries : Peptidyl-Ser-tetrahedral intermediate (with previous thioester)
I00148: 1 entry : 4-hydroxy-cytidine
I00149: 2 entries : 2-hydroxy-guanine
I00150: 1 entry : [CoA/ACP]-tetrahedral-acyl-sn-glycerol 3-phosphate
I00151: 1 entry : 4-hydroxy-cytosine
I00152: 1 entry : Methanediol
I00153: 10 entries : Peptidyl-Cys-tetrahedral intermediate (with previous peptide)
I00154: 11 entries : Acyl-enzyme (Peptidyl-Cys-acyl group)
I00155: 11 entries : Peptidyl-Cys-tetrahedral-intermediate
I00156: 1 entry : Peptidyl-Cys-alcohol-intermediate
I00158: 1 entry : Peptidyl-Cys-hydroxyl-L-glutamate
I00159: 1 entry : Peptidyl-Cys-acyl intermediate (with L-glutamate)
I00160: 1 entry : Peptidyl-Cys-tetrahedral intermediate (with L-glutamyl-phosphate)
I00161: 1 entry : External aldimine intermediate (PLP-2-amino-3-ketobutyric acid)
I00162: 1 entry : External aldimine intermediate (PLP-2-amino-3-ketobutyric acid-CoA-tetrahedral intermediate)
I00164: 1 entry : Gamma-glutamyl-NterminalThr-acyl-enzyme intermediate
I00165: 1 entry : External aldimine intermediate (PLP-L-Cys)
I00166: 1 entry : Quinonoid intermediate (PLP-Cys)
I00167: 1 entry : Ketimine intermediate (PLP-Cys)
I00171: 3 entries : Aminoacrylate intermediate (PLP-dehydroAla)
I00178: 2 entries : Enediol form of glycerone phosphate
I00181: 1 entry : External aldimine intermediate (PLP-L-Trp)
I00182: 1 entry : Quinonoid intermediate (PLP-Ser)
I00183: 1 entry : Quinonoid intermediate (PLP-Trp)
I00184: 1 entry : Quinonoid intermediate (PLP-S-alkyl-cysteine S-oxide)
I00185: 1 entry : Geminal-diamine transition-state (active-site-Lys-PLP-S-alkyl-L-cysteine S-oxide)
I00186: 1 entry : Glutathione-NterminalThr-enzyme tetrahedral-transition-state
I00187: 1 entry : Gamma-glutamyl-NterminalThr-enzyme tetrahedral-transition-state
I00188: 1 entry : Gamma-glutamyl-NterminalThr-AA-enzyme tetrahedral-transition-state
I00189: 1 entry : (5-L-Glutamyl)-peptide-NterminalThr-enzyme tetrahedral-transition-state
I00190: 1 entry : Peptidyl-Ser-7-glutarylaminocephalosporanate (tetrahedral transition-state)
I00191: 1 entry : Peptidyl-Ser-glutarate (acyl-enzyme intermediate)
I00192: 1 entry : Peptidyl-Ser-glutarate (tetrahedral transition-state)
I00195: 1 entry : Angiotensin II tetrahedral transition-state
C00067: 1 entry : Formaldehyde
C00647: 5 entries : Pyridoxamine phosphate
C04522: 1 entry : 2-Chloro-2,5-dihydro-5-oxofuran-2-acetate
Copyright: Nozomi Nagano, JST & CBRC-AIST
Funded by PRESTO/Japan Science and Technology Agency (JST) (December 2001 - November 2004)
Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2005 - March 2006)
Funded by Grant-in-Aid for Scientific Research (B)/Japan Society for the Promotion of Science (JSPS) (April 2005 - March 2008)
Funded by BIRD/Japan Science and Technology Agency (JST) (September 2005 - September 2008)
Funded by BIRD/Japan Science and Technology Agency (JST) (October 2007 - September 2010)
Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2011 - March 2012)
Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2012 - March 2013)
Supported by the commission for the Development of Artificial Gene Synthesis Technology for Creating Innovative Biomaterial from the Ministry of Economy, Trade and Industry (METI) (October 2012 - )