DB code: D00498
CATH domain | 1.10.760.10 : Cytochrome Bc1 Complex; Chain D, domain 2 | Catalytic domain |
---|---|---|
2.140.10.20 : Methanol Dehydrogenase; Chain A | Catalytic domain | |
E.C. | 1.7.2.1 1.7.99.1 1.9.3.1 | |
CSA | ||
M-CSA | ||
MACiE |
CATH domain | Related DB codes (homologues) |
---|---|
1.10.760.10 : Cytochrome Bc1 Complex; Chain D, domain 2 | D00055 M00179 |
2.140.10.20 : Methanol Dehydrogenase; Chain A | D00055 |
Uniprot Enzyme Name | UniprotKB | Protein name | Synonyms |
---|---|---|
P72181 |
Nitrite reductase
|
EC
1.7.2.1
Cytochrome cd1 Cytochrome oxidase Hydroxylamine reductase EC 1.7.99.1 |
KEGG enzyme name |
---|
nitrite reductase (NO-forming)
(EC 1.7.2.1 ) cd-cytochrome nitrite reductase (EC 1.7.2.1 ) [nitrite reductase (cytochrome)] [misleading, see comments.] (EC 1.7.2.1 ) cytochrome c-551:O2, NO2+ oxidoreductase (EC 1.7.2.1 ) cytochrome cd (EC 1.7.2.1 ) cytochrome cd1 (EC 1.7.2.1 ) hydroxylamine (acceptor) reductase (EC 1.7.2.1 ) methyl viologen-nitrite reductase (EC 1.7.2.1 ) nitrite reductase (cytochrome (EC 1.7.2.1 ) NO-forming) (EC 1.7.2.1 ) hydroxylamine reductase (EC 1.7.99.1 ) hydroxylamine (acceptor) reductase (EC 1.7.99.1 ) ammonia:(acceptor) oxidoreductase (EC 1.7.99.1 ) cytochrome-c oxidase (EC 1.9.3.1 ) cytochrome oxidase (EC 1.9.3.1 ) cytochrome a3 (EC 1.9.3.1 ) cytochrome aa3 (EC 1.9.3.1 ) Warburg's respiratory enzyme (EC 1.9.3.1 ) indophenol oxidase (EC 1.9.3.1 ) indophenolase (EC 1.9.3.1 ) complex IV (mitochondrial electron transport) (EC 1.9.3.1 ) ferrocytochrome c oxidase (EC 1.9.3.1 ) NADH cytochrome c oxidase (EC 1.9.3.1 ) |
UniprotKB: Accession Number | Entry name | Activity | Subunit | Subcellular location | Cofactor |
---|---|---|---|---|---|
P72181 | NIRS_PARPN | Nitric oxide + H(2)O + ferricytochrome c = nitrite + ferrocytochrome c + 2 H(+). NH(3) + H(2)O + acceptor = hydroxylamine + reduced acceptor. | Homodimer. | Periplasm. | Binds 2 heme groups per subunit. |
KEGG Pathways | Map code | Pathways | E.C. |
---|---|---|
MAP00190 | Oxidative phosphorylation | 1.9.3.1 |
MAP00910 | Nitrogen metabolism | 1.7.2.1 1.7.99.1 |
Compound table | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cofactors | Substrates | Products | Intermediates | ||||||||||||||||
KEGG-id | C00032 | C00032 | C00088 | C00126 | C00080 | C00014 | C00028 | C00007 | C00533 | C00001 | C00125 | C00192 | C00030 | ||||||
E.C. |
1.7.2.1
1.7.99.1 1.9.3.1 |
1.7.2.1
1.7.99.1 1.9.3.1 |
1.7.2.1
|
1.7.2.1
1.9.3.1 |
1.7.2.1
1.9.3.1 |
1.7.99.1
|
1.7.99.1
|
1.9.3.1
|
1.7.2.1
|
1.7.2.1
1.7.99.1 1.9.3.1 |
1.7.2.1
1.9.3.1 |
1.7.99.1
|
1.7.99.1
|
||||||
Compound | c heme | d1 heme | Nitrite | Ferrocytochrome c | H+ | Ammonia | Acceptor | O2 | Nitric oxide | H2O | Ferricytochrome c | Hydroxylamine | Reduced acceptor | ||||||
Type | aromatic ring (with nitrogen atoms),carboxyl group,heavy metal | aromatic ring (with nitrogen atoms),carboxyl group,heavy metal | others | amide group,amine group,aromatic ring (with nitrogen atoms),carboxyl group,heavy metal,sulfide group | others | amine group,organic ion | others | others | others | H2O | amide group,amine group,aromatic ring (with nitrogen atoms),carboxyl group,heavy metal,sulfide group | amine group | others | ||||||
ChEBI |
17627 26355 17627 26355 |
17627 26355 17627 26355 |
25567 25567 |
15378 15378 |
16134 16134 |
15379 26689 27140 15379 26689 27140 |
16480 16480 |
15377 15377 |
15429 15429 |
||||||||||
PubChem |
24529 24529 |
1038 1038 |
222 222 |
977 977 |
145068 145068 |
22247451 962 22247451 962 |
787 787 |
||||||||||||
1aofA01 | Bound:HEM | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aofB01 | Bound:HEM | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aomB01 | Bound:HEM | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aoqA01 | Bound:HEM | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aoqB01 | Bound:HEM | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1dy7B01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1e2rA01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1e2rB01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1gq1A01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1gq1B01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1h9xA01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1h9xB01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1h9yA01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1h9yB01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hcmA01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hcmB01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj3A01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj3B01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj4A01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj4B01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj5A01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj5B01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1qksA01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1qksB01 | Bound:HEC | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aofA02 | Unbound | Bound:DHE | Analogue:SO2 | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aofB02 | Unbound | Bound:DHE | Analogue:SO2 | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aomA02 | Unbound | Bound:DHE | Bound:2NO | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aomB02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Bound:_NO | Unbound | Unbound | Unbound | ||||||||
1aoqA02 | Unbound | Bound:DHE | Bound:2NO | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1aoqB02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Bound:_NO | Unbound | Unbound | Unbound | ||||||||
1dy7A02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Analogue:CMO | Unbound | Unbound | Unbound | ||||||||
1dy7B02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Analogue:CMO | Unbound | Unbound | Unbound | ||||||||
1e2rA02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Analogue:CYN | Unbound | Unbound | Unbound | ||||||||
1e2rB02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Analogue:CYN | Unbound | Unbound | Unbound | ||||||||
1gq1A02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1gq1B02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1h9xA02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1h9xB02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1h9yA02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Analogue:CYN | Unbound | Unbound | Unbound | ||||||||
1h9yB02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Analogue:CYN | Unbound | Unbound | Unbound | ||||||||
1hcmA02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hcmB02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj3A02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj3B02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Bound:OXY | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj4A02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj4B02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj5A02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1hj5B02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1qksA02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | ||||||||
1qksB02 | Unbound | Bound:DHE | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound | Unbound |
Reference for Active-site residues | ||
---|---|---|
resource | references | E.C. |
Active-site residues | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
PDB | Catalytic residues | Cofactor-binding residues | Modified residues | Main-chain involved in catalysis | Comment | |||||
1aofA01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-35 | ||||||||
1aofB01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-35 | ||||||||
1aomB01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1aoqA01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1aoqB01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1dy7B01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-31 | ||||||||
1e2rA01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-35 | ||||||||
1e2rB01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-35 | ||||||||
1gq1A01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | mutant Y25S | ||||||||
1gq1B01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | mutant Y25S | ||||||||
1h9xA01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-41 | ||||||||
1h9xB01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-41 | ||||||||
1h9yA01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-47 | ||||||||
1h9yB01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-47 | ||||||||
1hcmA01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-41 | ||||||||
1hcmB01 | ;HIS 69;MET 106(Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-41 | ||||||||
1hj3A01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1hj3B01 | ;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-25 | ||||||||
1hj4A01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1hj4B01 | ;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent); | truncated 1-25 | ||||||||
1hj5A01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1hj5B01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1qksA01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1qksB01 | HIS 17;HIS 69; (Heme c axial binding);CYS 65;CYS 68(Heme c covalent);TYR 25(Heme d1) | |||||||||
1aofA02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1aofB02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1aomA02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1aomB02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1aoqA02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1aoqB02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1dy7A02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1dy7B02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1e2rA02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1e2rB02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1gq1A02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1gq1B02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1h9xA02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1h9xB02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1h9yA02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1h9yB02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1hcmA02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1hcmB02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1hj3A02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1hj3B02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1hj4A02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1hj4B02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1hj5A02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1hj5B02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1qksA02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) | ||||||||
1qksB02 | HIS 345;HIS 388 | HIS 200(Heme d1 proximal binding) |
References for Catalytic Mechanism | ||
---|---|---|
References | Sections | No. of steps in catalysis |
[1]
|
Fig.7, p.373-374 | |
[3]
|
p.442-446 | |
[4]
|
||
[5]
|
Fig.3, p.236-239 | |
[6]
|
p.4034-4035 | |
[8]
|
Fig.6, p.10972-10974 | |
[11]
|
Fig.4 | |
[12]
|
p.1007-1008 | |
[13]
|
||
[14]
|
p.13075-13076 |
References | |
---|---|
[1] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 7736589 |
Journal | Cell |
Year | 1995 |
Volume | 81 |
Pages | 369-77 |
Authors | Fulop V, Moir JW, Ferguson SJ, Hajdu J |
Title | The anatomy of a bifunctional enzyme: structural basis for reduction of oxygen to water and synthesis of nitric oxide by cytochrome cd1. |
Related PDB | 1qks |
Related UniProtKB | |
[2] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 9405061 |
Journal | Biochemistry |
Year | 1997 |
Volume | 36 |
Pages | 16267-76 |
Authors | Cheesman MR, Ferguson SJ, Moir JW, Richardson DJ, Zumft WG, Thomson AJ |
Title |
Two enzymes with a common function but different heme ligands in the forms as isolated. |
Related PDB | |
Related UniProtKB | |
[3] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 9199411 |
Journal | J Mol Biol |
Year | 1997 |
Volume | 269 |
Pages | 440-55 |
Authors | Baker SC, Saunders NF, Willis AC, Ferguson SJ, Hajdu J, Fulop V |
Title | Cytochrome cd1 structure: unusual haem environments in a nitrite reductase and analysis of factors contributing to beta-propeller folds. |
Related PDB | |
Related UniProtKB | |
[4] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 9311786 |
Journal | Nature |
Year | 1997 |
Volume | 389 |
Pages | 406-12 |
Authors | Williams PA, Fulop V, Garman EF, Saunders NF, Ferguson SJ, Hajdu J |
Title | Haem-ligand switching during catalysis in crystals of a nitrogen-cycle enzyme. |
Related PDB | 1aof 1aom 1aoq |
Related UniProtKB | |
[5] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10320660 |
Journal | Biochim Biophys Acta |
Year | 1999 |
Volume | 1411 |
Pages | 231-49 |
Authors | Cutruzzola F |
Title | Bacterial nitric oxide synthesis. |
Related PDB | |
Related UniProtKB | |
[6] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10747791 |
Journal | Biochemistry |
Year | 2000 |
Volume | 39 |
Pages | 4028-36 |
Authors | Koppenhofer A, Little RH, Lowe DJ, Ferguson SJ, Watmough NJ |
Title | Oxidase reaction of cytochrome cd(1) from Paracoccus pantotrophus. |
Related PDB | |
Related UniProtKB | |
[7] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10757972 |
Journal | Biochemistry |
Year | 2000 |
Volume | 39 |
Pages | 4243-9 |
Authors | Koppenhofer A, Turner KL, Allen JW, Chapman SK, Ferguson SJ |
Title |
Cytochrome cd(1) from Paracoccus pantotrophus exhibits kinetically gated, |
Related PDB | |
Related UniProtKB | |
[8] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10998233 |
Journal | Biochemistry |
Year | 2000 |
Volume | 39 |
Pages | 10967-74 |
Authors | Sjogren T, Svensson-Ek M, Hajdu J, Brzezinski P |
Title | Proton-coupled structural changes upon binding of carbon monoxide to cytochrome cd1: a combined flash photolysis and X-ray crystallography study. |
Related PDB | 1dy7 |
Related UniProtKB | |
[9] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10827177 |
Journal | J Biol Chem |
Year | 2000 |
Volume | 275 |
Pages | 25089-94 |
Authors | Jafferji A, Allen JW, Ferguson SJ, Fulop V |
Title | X-ray crystallographic study of cyanide binding provides insights into the structure-function relationship for cytochrome cd1 nitrite reductase from Paracoccus pantotrophus. |
Related PDB | 1e2r |
Related UniProtKB | |
[10] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 10708389 |
Journal | Microbiology |
Year | 2000 |
Volume | 146 |
Pages | 509-16 |
Authors | Saunders NF, Ferguson SJ, Baker SC |
Title |
Transcriptional analysis of the nirS gene, |
Related PDB | |
Related UniProtKB | |
[11] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 11062553 |
Journal | Nat Struct Biol |
Year | 2000 |
Volume | 7 |
Pages | 1006-12 |
Authors | Hajdu J, Neutze R, Sjogren T, Edman K, Szoke A, Wilmouth RC, Wilmot CM |
Title | Analyzing protein functions in four dimensions. |
Related PDB | |
Related UniProtKB | |
[12] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 11373294 |
Journal | J Biol Chem |
Year | 2001 |
Volume | 276 |
Pages | 29450-5 |
Authors | Sjogren T, Hajdu J |
Title | The Structure of an alternative form of Paracoccus pantotrophus cytochrome cd(1) nitrite reductase. |
Related PDB | 1h9x 1h9y 1hcm |
Related UniProtKB | |
[13] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 11278884 |
Journal | J Biol Chem |
Year | 2001 |
Volume | 276 |
Pages | 13072-6 |
Authors | Sjogren T, Hajdu J |
Title | Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase. |
Related PDB | 1hj3 1hj4 1hj5 |
Related UniProtKB | |
[14] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 11035020 |
Journal | J Biol Chem |
Year | 2001 |
Volume | 276 |
Pages | 5846-55 |
Authors | Steensma E, Gordon E, Oster LM, Ferguson SJ, Hajdu J |
Title | Heme ligation and conformational plasticity in the isolated c domain of cytochrome cd1 nitrite reductase. |
Related PDB | |
Related UniProtKB | |
[15] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 12086580 |
Journal | Biochem J |
Year | 2002 |
Volume | 366 |
Pages | 883-8 |
Authors | Allen JW, Higham CW, Zajicek RS, Watmough NJ, Ferguson SJ |
Title |
A novel, |
Related PDB | |
Related UniProtKB | |
[16] | |
Resource | |
Comments | |
Medline ID | |
PubMed ID | 12556530 |
Journal | J Biol Chem |
Year | 2003 |
Volume | 278 |
Pages | 11773-81 |
Authors | Gordon EH, Sjogren T, Lofqvist M, Richter CD, Allen JW, Higham CW, Hajdu J, Fulop V, Ferguson SJ |
Title | Structure and kinetic properties of Paracoccus pantotrophus cytochrome cd1 nitrite reductase with the d1 heme active site ligand tyrosine 25 replaced by serine. |
Related PDB | 1gq1 |
Related UniProtKB |
Comments |
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This structure contains a heme protein, Although this enzyme is homologous to the counterpart from Pseudomonas aeriginosa (Swiss-prot; P24474, Although only two E.C. Thus, (a) NO2(-) + 2 H(+) + e- = NO + H2O (b) NH3 + H2O + acceptor = hydroxylamine + reduced acceptor. (c) O2 + 4 H(+) + 4 e- = 2 H2O ##### There are some other kind of "nitrite reductases": E.C. E.C. E.C. Another nitrite reductase enzyme (E.C. |
Created | Updated |
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2005-07-05 | 2009-02-26 |